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Lawrence Hunter
Top Co-Authors:
K. Bretonnel Cohen (26)
William A. Baumgartner (10)
Helen L. Johnson (7)
Philip V. Ogren (7)
Sonia M. Leach (6)
Lu Zhi-yong (6)
Thomas C. Rindflesch (5)
Lorraine K. Tanabe (5)
J. Gregory Caporaso (5)
David J. States (4)
Imran A. Shah (4)
Michael Bada (4)
Lynne M. Fox (4)
John N. Weinstein (3)
Jae Kyung Lee (3)
Uwe Scherf (3)
Nomi L. Harris (3)
Hyun-min Kim (3)
Karin Verspoor (3)
Andrew Dolbey (3)
ObjectID : Author/29512
Lawrence Hunter
(
Publications: 93
)
(
Citation Count: 488
)
(
G-Index: 18
)
(
H-Index: 11
)
HomePage
9th floor,; 8600 Rockville Pike , Bethesda , MD 20894 , U.S.A.
National Cancer Institute, Bethesda, MD
Permanent Link:
http://academic.research.microsoft.com/Author/29512.aspx
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Papers
Citations
Year 2009
Yoshinobu Kano
,
William A. Baumgartner
,
Luke Mccrohon
,
Sophia Ananiadou
,
K. Bretonnel Cohen
,
Lawrence Hunter
,
Jun-ichi Tsujii
:
U-Compare: share and compare text mining tools with UIMA
,
BIOINFORMATICS
, 2009
Hannah J. Tipney
,
Sonia M. Leach
,
Weiguo Feng
,
Richard Spritz
,
Trevor Williams
,
Lawrence Hunter
:
Leveraging existing biological knowledge in the identification of candidate genes for facial dysmorphology
,
BMC Bioinformatics
, 2009
Edward H. Shortliffe
,
Andrea Califano
,
Lawrence Hunter
:
New JBI emphasis on translational bioinformatics
,
JBI
, 2009
Karin Verspoor
,
Daniel Dvorkin
,
K. Bretonnel Cohen
,
Lawrence Hunter
:
Ontology quality assurance through analysis of term transformations
,
BIOINFORMATICS
, 2009
Karin Verspoor
,
K. Bretonnel Cohen
,
Lawrence Hunter
:
The textual characteristics of traditional and Open Access scientific journals are similar
,
BMC Bioinformatics
, 2009
Year 2008
J. Gregory Caporaso
,
Nita Deshpande
,
J. Lynn Fink
,
Philip E. Bourne
,
K. Bretonnel Cohen
,
Lawrence Hunter
:
Intrinsic Evaluation of Text Mining Tools May Not Predict Performance on Realistic Tasks
,
Pacific Symposium on Biocomputing
, 2008
(
Citations: 3
)
Steven Bethard
,
Zhiyong Lu
,
James H. Martin
,
Lawrence Hunter
:
Semantic role labeling for protein transport predicates
,
BMC Bioinformatics
, 2008
(
Citations: 3
)
Lawrence Hunter
,
Zhiyong Lu
,
James Firby
,
William A. Baumgartner
,
Helen L. Johnson
,
Philip V. Ogren
,
K. Bretonnel Cohen
:
OpenDMAP: An open source, ontology-driven concept analysis engine, with applications to capturing knowledge regarding protein transport, protein interactions and cell-type-specific gene expression
,
BMC Bioinformatics
, 2008
(
Citations: 1
)
Michael Bada
,
Lawrence Hunter
:
Identification of OBO nonalignments and its implications for OBO enrichment
,
BIOINFORMATICS
, 2008
(
Citations: 1
)
Aaron Gabow
,
Sonia M. Leach
,
William A. Baumgartner
,
Lawrence Hunter
,
Debra Goldberg
:
Improving protein function prediction methods with integrated literature data
,
BMC Bioinformatics
, 2008
Anis Karimpour-fard
,
Sonia M. Leach
,
Ryan T. Gill
,
Lawrence Hunter
:
Predicting protein linkages in bacteria: Which method is best depends on task
,
BMC Bioinformatics
, 2008
Michael Bada
,
Chris Mungall
,
Lawrence Hunter
:
A Call for an Abductive Reasoning Feature in OWL-Reasoning Tools toward Ontology Quality Control
,
OWLED
, 2008
Year 2007
William A. Baumgartner
,
K. Bretonnel Cohen
,
Lynne M. Fox
,
George Acquaah-mensah
,
Lawrence Hunter
:
Manual curation is not sufficient for annotation of genomic databases
,
Intelligent Systems in Molecular Biology
, 2007
(
Citations: 12
)
J. Gregory Caporaso
,
William A. Baumgartner
,
David A. Randolph
,
K. Bretonnel Cohen
,
Lawrence Hunter
:
MutationFinder: a high-performance system for extracting point mutation mentions from text
,
BIOINFORMATICS
, 2007
(
Citations: 8
)
Michael Bada
,
Lawrence Hunter
:
Enrichment of OBO ontologies
,
JBI
, 2007
(
Citations: 3
)
Helen L. Johnson
,
K. Bretonnel Cohen
,
Lawrence Hunter
:
A Fault Model for Ontology Mapping, Alignment, and Linking Systems
,
Pacific Symposium on Biocomputing
, 2007
(
Citations: 3
)
J. Gregory Caporaso
,
William A. Baumgartner
,
David A. Randolph
,
K. Bretonnel Cohen
,
Lawrence Hunter
:
Rapid Pattern Development for Concept Recognition Systems: Application to Point mutations
,
JBCB
, 2007
(
Citations: 4
)
Zhiyong Lu
,
K. Bretonnel Cohen
,
Lawrence Hunter
:
Generif Quality Assurance as Summary Revision
,
Pacific Symposium on Biocomputing
, 2007
(
Citations: 3
)
Sonia M. Leach
,
Aaron Gabow
,
Lawrence Hunter
,
Debra Goldberg
:
Assessing and Combining Reliability of Protein Interaction Sources
,
Pacific Symposium on Biocomputing
, 2007
(
Citations: 2
)
Hyunmin Kim
,
Katherina J. Kechris
,
Lawrence Hunter
:
Mining Discriminative Distance Context of Transcription Factor Binding Sites on ChIP Enriched Regions
,
ISBRA
, 2007
(
Citations: 1
)
Year 2006
Zhiyong Lu
,
K. Bretonnel Cohen
,
Lawrence Hunter
:
Finding GeneRIFs via Gene Ontology Annotations
,
Pacific Symposium on Biocomputing
, 2006
(
Citations: 11
)
Helen L. Johnson
,
K. Bretonnel Cohen
,
William A. Baumgartner
,
Zhiyong Lu
,
Michael Bada
,
Todd Kester
,
Hyunmin Kim
,
Lawrence Hunter
:
Evaluation of Lexical Methods for Detecting Relationships Between Concepts from Multiple Ontologies
,
Pacific Symposium on Biocomputing
, 2006
(
Citations: 9
)
J. Gregory Caporaso
,
William A. Baumgartner
,
Hyunmin Kim
,
Zhiyong Lu
,
Helen L. Johnson
,
Olga Medvedeva
,
Anna Lindemann
,
Lynne M. Fox
,
Elizabeth K. White
,
K. Bretonnel Cohen
,
Lawrence Hunter
:
Concept Recognition, Information Retrieval, and Machine Learning in Genomics Question-Answering
,
TREC
, 2006
(
Citations: 3
)
K. Bretonnel Cohen
,
Lawrence Hunter
:
A critical review of PASBio's argument structures for biomedical verbs
,
BMC Bioinformatics
, 2006
(
Citations: 2
)
Year 2005
Philip V. Ogren
,
K. Bretonnel Cohen
,
Lawrence Hunter
:
Implications of Compositionality in the Gene Ontology for Its Curation and Usage
,
Pacific Symposium on Biocomputing
, 2005
(
Citations: 7
)
J. Gregory Caporaso
,
William A. Baumgartner
,
K. Bretonnel Cohen
,
Helen L. Johnson
,
Jesse Paquette
,
Lawrence Hunter
:
Concept Recognition and the TREC Genomics Tasks
,
TREC
, 2005
(
Citations: 4
)
Z. Lu
,
Lawrence Hunter
:
GO Molecular Function Terms Are Predictive of Subcellular Localization
,
Pacific Symposium on Biocomputing
, 2005
(
Citations: 4
)
Shuhei Kinoshita
,
K. Bretonnel Cohen
,
Philip V. Ogren
,
Lawrence Hunter
:
BioCreAtIvE Task1A: entity identification with a stochastic tagger
,
BMC Bioinformatics
, 2005
Year 2004
Philip V. Ogren
,
K. Bretonnel Cohen
,
George Acquaah-mensah
,
Jens Eberlein
,
Lawrence Hunter
:
The Compositional Structure of Gene Ontology Terms
,
Pacific Symposium on Biocomputing
, 2004
(
Citations: 36
)
Lawrence Hunter
:
Life and Its Molecules: A Brief Introduction
,
AIM
, 2004
(
Citations: 2
)
Min Hong
,
Anis Kairmpour-fard
,
Steve Russell
,
Lawrence Hunter
:
Integrated Term Weighting, Visualization, and User Interface Development for Bioinformation Retrieval
,
AIS
, 2004
Year 2003
Tzu L. Phang
,
Margaret C. Neville
,
Michael Rudolph
,
Lawrence Hunter
:
Trajectory Clustering: A Non-Parametric Method for Grouping Gene Expression Time Courses with Applications to Mammary Development
,
Pacific Symposium on Biocomputing
, 2003
(
Citations: 3
)
Eric W. Brown
,
Andrew Dolbey
,
Lawrence Hunter
:
IBM Research and the University of Colorado - TREC 2003 Genomics Track
,
TREC
, 2003
(
Citations: 2
)
Russ B. Altman
,
A. Keith Dunker
,
Lawrence Hunter
,
Teri E. Klein
:
Special Paper - Introduction
,
Pacific Symposium on Biocomputing
, 2003
Year 2002
K. Bretonnel Cohen
,
Andrew Dolbey
,
George Acquaah-mensah
,
Lawrence Hunter
:
Contrast and variability in gene names
,
ACL
, 2002
(
Citations: 21
)
Mary E. Edgerton
,
Ronald C. Taylor
,
John I. Powell
,
Lawrence Hunter
,
Richard Simon
,
Edison T. Liu
:
A bioinformatics tool to select sequences for microarray studies of mouse models of oncogenesis
,
BIOINFORMATICS
, 2002
(
Citations: 2
)
Lawrence Hunter
,
Richard H. Lathrop
:
Guest Editors' Introduction-Computer Science and Biology: An Unlikely Pair
,
EXPERT
, 2002
L. Hunter
,
R.h. Lathrop
:
Computer-science and biology: An unlikely pair
, 2002
Year 2001
Lawrence Hunter
,
Ronald C. Taylor
,
Sonia M. Leach
,
Richard Simon
:
GEST: a gene expression search tool based on a novel Bayesian similarity metric
,
Intelligent Systems in Molecular Biology
, 2001
(
Citations: 14
)
Year 2000
Thomas C. Rindflesch
,
Jayant V. Rajan
,
Lawrence Hunter
:
Extracting Molecular Binding Relationships from Biomedical Text
,
ANLP
, 2000
(
Citations: 40
)
T. C. Rindflesch
,
L. Tanabe
,
J. N. Weinstein
,
L. Hunter
:
Edgar: extraction of drugs
, 2000
(
Citations: 29
)
T. C. Rindflesch
,
J. V. Rajan
,
L. Hunter
:
Extracting molecular binding terms from biomedical text
, 2000
(
Citations: 1
)
Year 1999
Thomas C. Rindflesch
,
Lawrence Hunter
,
Alan R. Aronson
:
Mining Molecular Binding Terminology from Biomedical Text
, 1999
(
Citations: 38
)
L. Tanabe
,
U. Scherf
,
L. H. Smith
,
J. K. Lee
,
L. Hunter
,
J. N. Weinstein
:
MedMiner: An Internet Text-Mining Tool for Biomedical Infor-mation
, 1999
(
Citations: 10
)
T. C. Rindflesch
,
L. Hunter
,
A. R. Aronson
:
Proc AMIA Symp: 127
, 1999
(
Citations: 1
)
L. Tanabe
,
U. Scherf
,
L. H. Smith
,
J. K. Lee
,
L. Hunter
:
MedMiner: an Internet text-mining tool for biomedical information, with application to gene expressi
, 1999
(
Citations: 1
)
Lawrence Hunter
:
Progress in computational molecular biology
,
ACM SIGBIO Newsletter
, 1999
(
Citations: 1
)
Sonia M. Leach
,
Lawrence Hunter
,
David Landsman
:
Comparison of Clustering Metrics and Unsupervised Learning Algorithms on Genome-Wide Gene Expression Level Data
,
AAAI
, 1999
Year 1998
Imran Shah
,
Lawrence Hunter
:
Identification of Divergent Functions in Homologous Proteins by Induction over Conserved Modules
,
Intelligent Systems in Molecular Biology
, 1998
(
Citations: 3
)
Year 1997
Imran Shah
,
Lawrence Hunter
:
Predicting Enzyme Function from Sequence: A Systematic Appraisal
,
Intelligent Systems in Molecular Biology
, 1997
(
Citations: 11
)
Jeffrey L. Krichmar
,
Giorgio A. Ascoli
,
Lawrence Hunter
,
James L. Olds
:
A Model of Cerebellar Saccadic Motor Learning Using Qualitative Reasoning
,
IWANN
, 1997
(
Citations: 2
)
Lawrence Hunter
,
Barry Zeeberg
:
Identifying Chimerism in Proteins Using Hidden Markov Models of Codon Usage
,
Intelligent Systems in Molecular Biology
, 1997
Year 1996
David L. Dowe
,
Lloyd Allison
,
Trevor I. Dix
,
Lawrence Hunter
,
S Chris
:
Circular Clustering Of Protein Dihedral Angles By Minimum Message Length
, 1996
(
Citations: 9
)
Myriam Abramson
,
Lawrence Hunter
:
Classification using cultural co-evolution and genetic programming
, 1996
(
Citations: 9
)
Lawrence Hunter
:
Coevolution Learning: Synergistic Evolution of Learning Agents and Problem Representations
, 1996
(
Citations: 1
)
Year 1994
David B. Searls
,
Jude W. Shavlik
,
Lawrence Hunter
:
The First International Conference on Intelligent Systems for Molecular Biology
,
AIM
, 1994
Year 1993
Lawrence Hunter
,
Teri E. Klein
:
Finding Relevant Biomolecular Features
,
Intelligent Systems in Molecular Biology
, 1993
(
Citations: 6
)
David J. States
,
Nomi L. Harris
,
Lawrence Hunter
:
Computationally Efficient Cluster Representation in Molecular Sequence Megaclassification
,
Intelligent Systems in Molecular Biology
, 1993
(
Citations: 5
)
Hiroaki Kitano
,
Walther Von Hahn
,
Lawrence Hunter
,
Ryuichi Oka
,
Benjamin W. Wah
,
Toshio Yokoi
:
Grand Challenge AI Applications
,
IJCAI
, 1993
(
Citations: 5
)
Year 1992
Ashwin Ram
,
Lawrence Hunter
:
The use of explicit goals for knowledge to guide inference and learning
,
APIN
, 1992
(
Citations: 40
)
Nomi L. Harris
,
Lawrence Hunter
,
David J. States
:
Mega-Classification: Discovering Motifs in Massive Datastreams
,
AAAI
, 1992
(
Citations: 11
)
Lawrence Hunter
,
David J. States
:
Bayesian Classification of Protein Structure
,
EXPERT
, 1992
(
Citations: 9
)
Lawrence Hunter
:
Artificial Intelligence and Molecular Biology
,
AAAI
, 1992
(
Citations: 1
)
Lawrence Hunter
,
Nomi L. Harris
,
David J. States
:
Efficient Classification of Massive, Unsegmented Datastreams
,
ICML
, 1992
(
Citations: 1
)
Year 1991
Ashwin Ram
,
Lawrence Hunter
:
A Goal-Based Approach to Intelligent Information Retrieval
,
ICML
, 1991
(
Citations: 6
)
Lawrence Hunter
:
Artificial Intelligence and Molecular Biology
,
AIM
, 1991
(
Citations: 4
)
Year 1990
L. Hunter
:
Knowledge acquisition planning for inference from large databases
, 1990
(
Citations: 10
)
Year 1989
L. E. Hunter
:
Knowledge Acquisition Planning: Gaining Expertise Through Experience
, 1989
(
Citations: 6
)
L. E. Hunter
:
Knowledge Acquisition Through Experience
, 1989
(
Citations: 3
)
Lawrence Hunter
:
Knowledge Acquisition Planning: Results and Prospects
,
ICML
, 1989
(
Citations: 2
)
Year 1988
Lawrence Hunter
:
Estimating Human Cognitive Capacities: A Response to Landauer
,
COGSCI
, 1988
(
Citations: 1
)
Year 1986
R. C. Schank
,
G. C. Collins
,
L. E. Hunter
:
Transcending inductive category formation in learning
, 1986
(
Citations: 32
)
Year 1977
Lawrence Hunter
,
Jose C. Ingojo
:
Conservation of software science parameters across modularization
,
ACM/CSC-ER
, 1977
Year Unknown
Lorraine Tanabe
,
Uwe Scherf
,
H Lawrence
,
Jae K. Lee
,
George S. Michaels
,
Lawrence Hunter
,
John N. Weinstein
:
MedMiner: An Internet Tool for Filtering and Organizing Biomedical Information
(
Citations: 1
)
K. Bretonnel Cohen
,
Lorraine Tanabe
,
Shuhei Kinoshita
,
Lawrence Hunter
:
A resource for constructing customized test suites for molecular biology entity identification syste
(
Citations: 5
)
Lawrence Hunter
,
Harold Morowitz
:
Molecular Biology for Computer Scientists
(
Citations: 7
)
K. Bretonnel Cohen
,
Lawrence Hunter
:
Natural Language Processing and Systems Biology
(
Citations: 6
)
Lawrence Hunter
:
Software testing and the naturally occurring data assumption in natural language processing
(
Citations: 1
)
David L. Dowe
,
Lloyd Allison
,
Trev O Ri.d Ix
,
Lawrence Hunter
,
Chris S. Wallace
,
Timoth Ye Dgoose
:
CIRCULAR CLUSTERING BY MINIMUM MESSAGE LENGTH OF PROTEIN DIHEDRAL ANGLES
(
Citations: 1
)
Lawrence Hunter
:
Planning to Learn About Protein Structure
(
Citations: 2
)
I. Shah
,
L. Hunter
:
Visual Management of Large Scale Data Mining Projects
(
Citations: 1
)
Lawrence Hunter
:
Ontologies for programs not people
(
Citations: 1
)
Imran Shah
,
Lawrence Hunter
:
Predicting Enzyme Function from Sequence:
(
Citations: 1
)
Xinran Hu
,
David Friedman
,
Salisha Hill
,
Richard Caprioli
,
Wendell Nicholson
,
Alvin C Powers
,
Lawrence Hunter
,
Lee E Limbird
:
Proteomic exploration of pancreatic islets in mice null for the
K. Bretonnel Cohen
,
Karin Verspoor
,
Helen L. Johnson
,
Chris Roeder
,
Philip V. Ogren
,
William A. Baumgartner
,
Elizabeth White
,
Hannah Tipney
,
Lawrence Hunter
:
High-precision biological event extraction with a concept recognizer
Beth A. Tamburini
,
Susan Trapp
,
Tzu Lip Phang
,
Jill T. Schappa
,
Lawrence E. Hunter
,
F Jaime
:
Gene Expression Profiles of Sporadic Canine Hemangiosarcoma Are Uniquely Associated with Breed
Lawrence Hunter
,
Jefferyl.krichmar
,
L.olds
,
Mail Stop 2a1
:
QualitativeReasoning asa Modeling Tool forComputational Neuroscience
Helen L. Johnson
,
Lynne M. Fox
,
Zoya Voronovich
,
K. Bretonnel Cohen
,
Lawrence Hunter
:
Two approaches to principled query expansion for genomics question-answering
Lawrence Hunter
,
K. Bretonnel Cohen
,
Literature Overload
:
Perspective Biomedical Language Processing: What’s Beyond PubMed?
Shuhei Kinoshita
,
Philip Ogren
,
K. Bretonnel Cohen
,
Lawrence Hunter
:
Entity identification in the molecular biology domain with a stochastic POS tagger: the BioCreative
Eric W. Brown
,
Andrew Dolbey
,
Lawrence Hunter
:
TREC 2003 Genomics Track
K. Bretonnel Cohen
,
Lynne Fox
,
Philip V. Ogren
,
Lawrence Hunter
:
Empirical data on corpus design and usage in biomedical natural language processing
Yves Lussier
,
Atul Butte
,
Lawrence Hunter
:
Special Issue on Methodologies for Translational Bioinformatics