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Co-authors
(228)
John F Quackenbush
11
Razvan Sultana
8
Svetlana A. Karamycheva
7
Jennifer Whelden Cho
6
Steven Salzberg
5
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Authors
Geo Pertea
Geo Pertea,Johns Hopkins University,Genetics & Genealogy,Molecular Biology,Biochemistry
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Geo Pertea
Johns Hopkins University
Publications:
17
|
Citations:
1605
Fields:
Genetics & Genealogy
,
Molecular Biology
,
Biochemistry
View FAQ about top research areas and Fields of study
Collaborated with
228 co-authors
from 2000 to 2012
|
Cited by
7128 authors
Cumulative
Annual
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Publications
(17)
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RefWorks
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Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks
Adam Roberts
,
Loyal Goff
,
Geo Pertea
,
Daehwan Kim
,
David R Kelley
,
Harold Pimentel
,
Steven L Salzberg
,
John L Rinn
,
Lior Pachter
,
Cole Trapnell
Journal:
Nature Protocols - NAT PROTOC
, vol. 7, no. 3, pp. 562-578, 2012
Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation
(
Citations: 112
)
Cole Trapnell
,
Brian A Williams
,
Geo Pertea
,
Ali Mortazavi
,
Gordon Kwan
,
Marijke J van Baren
,
Steven L Salzberg
,
Barbara J Wold
,
Lior Pachter
Journal:
Nature Biotechnology - NAT BIOTECHNOL
, vol. 28, no. 5, pp. 511-515, 2010
A whole-genome assembly of the domestic cow, Bos taurus
(
Citations: 33
)
Aleksey V Zimin
,
Arthur L Delcher
,
Liliana Florea
,
David R Kelley
,
Michael C Schatz
,
Daniela Puiu
,
Finnian Hanrahan
,
Geo Pertea
,
Curtis P Van Tassell
,
Tad S Sonstegard
,
Guillaume Marçais
,
Michael Roberts
http://academic.research.microsoft.com/io.ashx?type=5&id=38616184&selfId1=518762&selfId2=0&maxNumber=12&query=
Journal:
Genome Biology - GENOME BIOL
, vol. 10, no. 4, pp. R42-10, 2009
Elevated expression of protein biosynthesis genes in liver and muscle of hibernating black bears (Ursus americanus)
(
Citations: 8
)
V. B. Fedorov
,
A. V. Goropashnaya
,
O. Toien
,
N. C. Stewart
,
A. Y. Gracey
,
C. Chang
,
S. Qin
,
G. Pertea
,
J. Quackenbush
,
L. C. Showe
,
M. K. Showe
,
B. B. Boyer
http://academic.research.microsoft.com/io.ashx?type=5&id=38383079&selfId1=518762&selfId2=0&maxNumber=12&query=
Journal:
Physiological Genomics - PHYSIOL GENOMICS
, vol. 37, no. 2, pp. 108-118, 2009
Global comparative analysis of ESTs from the southern cattle tick, Rhipicephalus (Boophilus) microplus
(
Citations: 16
)
Minghua Wang
,
Felix D Guerrero
,
Geo Pertea
,
Vishvanath M Nene
Journal:
BMC Genomics
, vol. 8, no. 1, pp. 368-14, 2007
Sort by:
Citations
(1605 times by 1465 publications)
RNA-Seq Mapping and Detection of Gene Fusions with a Suffix Array Algorithm
Onur Sakarya
,
Heinz Breu
,
Milan Radovich
,
Yongzhi Chen
,
Yulei N. Wang
,
Catalin Barbacioru
,
Sowmi Utiramerur
,
Penn P. Whitley
,
Joel P. Brockman
,
Paolo Vatta
,
Zheng Zhang
,
Liviu Popescu
http://academic.research.microsoft.com/io.ashx?type=5&id=57417701&selfId1=518762&selfId2=0&maxNumber=12&query=
Journal:
PLOS Computational Biology - PLOS COMPUT BIOL
, vol. 8, no. 4, 2012
Transcription factor TEAD4 regulates expression of Myogenin and the unfolded protein response genes during C2C12 cell differentiation
(
Citations: 1
)
A Benhaddou
,
C Keime
,
T Ye
,
A Morlon
,
I Michel
,
B Jost
,
G Mengus
,
I Davidson
Journal:
Cell Death and Differentiation - CELL DEATH DIFFERENTIATION
, vol. 19, no. 2, pp. 220-231, 2012
Comparative Genomics of the Apicomplexan Parasites Toxoplasma gondii and Neospora caninum: Coccidia Differing in Host Range and Transmission Strategy
Adam James Reid
,
Sarah J. Vermont
,
James A. Cotton
,
David Harris
,
Grant A. Hill-Cawthorne
,
Stephanie Könen-Waisman
,
Sophia M. Latham
,
Tobias Mourier
,
Rebecca Norton
,
Michael A. Quail
,
Mandy Sanders
,
Dhanasekaran Shanmugam
http://academic.research.microsoft.com/io.ashx?type=5&id=57412444&selfId1=518762&selfId2=0&maxNumber=12&query=
Journal:
PLOS Pathogens - PLOS PATHOG
, vol. 8, no. 3, 2012
A Systematically Improved High Quality Genome and Transcriptome of the Human Blood Fluke Schistosoma mansoni
Anna V. Protasio
,
Isheng J. Tsai
,
Anne Babbage
,
Sarah Nichol
,
Martin Hunt
,
Martin A. Aslett
,
Nishadi De Silva
,
Giles S. Velarde
,
Tim J. C. Anderson
,
Richard C. Clark
,
Claire Davidson
,
Gary P. Dillon
http://academic.research.microsoft.com/io.ashx?type=5&id=57416641&selfId1=518762&selfId2=0&maxNumber=12&query=
Journal:
PLOS Neglected Tropical Diseases - PLOS NEGLECTED TROP DIS
, vol. 6, no. 1, 2012
Functional Implications of Novel Human Acid Sphingomyelinase Splice Variants
Cosima Rhein
,
Philipp Tripal
,
Angela Seebahn
,
Alice Konrad
,
Marcel Kramer
,
Christine Nagel
,
Jonas Kemper
,
Jens Bode
,
Christiane Mühle
,
Erich Gulbins
,
Martin Reichel
,
Cord-Michael Becker
http://academic.research.microsoft.com/io.ashx?type=5&id=57404050&selfId1=518762&selfId2=0&maxNumber=12&query=
Journal:
PLOS One
, vol. 7, no. 4, 2012
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