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Keywords
(6)
Central Nervous System
Differential Interference Contrast
Image Sequence
Shape Deformation
Neural Stem Cell
Stem Cell
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Reliably Tracking Partially Overlapping Neural Stem Cells in DIC Microscopy Image Sequences
Reliably Tracking Partially Overlapping Neural Stem Cells in DIC Microscopy Image Sequences,Ryoma Bise,Kang Li,Sungeun Eom,Takeo Kanade
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Reliably Tracking Partially Overlapping Neural Stem Cells in DIC Microscopy Image Sequences
(
Citations: 3
)
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Ryoma Bise
,
Kang Li
,
Sungeun Eom
,
Takeo Kanade
Automated tracking of individual cells in populations aims at obtaining fine-grained measurements of cell behaviors, including migration (translocation), mitosis (division), apoptosis (death),
shape deformation
of individual cells, and their interactions among cells. Such detailed analysis of cell behaviors requires the capabilities to reliably track cells that may sometimes partially overlap, forming cell clusters, and to distinguish cellular mitosis/fusion from split and merge of cell clusters. Existing cell tracking algorithms are short of these capabilities. In this paper, we propose a cell tracking method based on partial contour matching that is capable of robustly tracking partially overlapping cells, while maintaining the identity information of individual cells throughout the process from their initial contact to eventual separation. The method has been applied to a task of tracking human
central nervous system
(CNS) stem cells in
differential interference contrast
(DIC) microscopy image sequences, and has achieved 97% tracking accuracy.
Published in 2009.
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(
ubimon.doc.ic.ac.uk
)
Citation Context
(3)
...When tracking the overlapped blob in the succeeding frames, we apply a contour-matching method [
2
] to separate it into its member cells, thus the cell identities are maintained...
Takeo Kanade
,
et al.
Cell image analysis: Algorithms, system and applications
...The overlapped cells can be handled by the algorithm in [
1
]...
Zhaozheng Yin
,
et al.
Restoring artifact-free microscopy image sequences
...Kachouie et al. [23] and Bise et al. [
24
] extended spatiotemporal approaches to livecell segmentation and tracking in DIC videos...
Richard M. Jiang
,
et al.
Live-Cell Tracking Using SIFT Features in DIC Microscopic Videos
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Citations
(3)
Cell image analysis: Algorithms, system and applications
(
Citations: 1
)
Takeo Kanade
,
Zhaozheng Yin
,
Ryoma Bise
,
Seungil Huh
,
Sungeun Eom
,
Michael F. Sandbothe
,
Mei Chen
Conference:
Workshop on Applications of Computer Vision - WACV
, pp. 374-381, 2011
Restoring artifact-free microscopy image sequences
Zhaozheng Yin
,
Takeo Kanade
Conference:
IEEE International Symposium on Biomedical Imaging
, pp. 909-913, 2011
Live-Cell Tracking Using SIFT Features in DIC Microscopic Videos
(
Citations: 1
)
Richard M. Jiang
,
Danny Crookes
,
Nie Luo
,
Michael W. Davidson
Journal:
IEEE Transactions on Biomedical Engineering - IEEE TRANS BIOMED ENG
, vol. 57, no. 9, pp. 2219-2228, 2010