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Steric accessibility of reactive centers in B-DNA

Steric accessibility of reactive centers in B-DNA,10.1002/qua.560200106,International Journal of Quantum Chemistry,Richard Lavery,Alberte Pullman,Bern

Steric accessibility of reactive centers in B-DNA   (Citations: 16)
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Journal: International Journal of Quantum Chemistry - INT J QUANTUM CHEM , vol. 20, no. 1, pp. 49-62, 1981
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    • ...In addition, sequence-dependent changes in the steric accessibility of N7-nitrogen in guanine residues may be important in some cases (24, 25)...
    • ...The data suggest Figure 5. Plots of alkylation efficiency vs calculated (25) MEP for individual guanine residues in the 377 base pair EcoR I-BamH I restriction fragment from pBR322 (analysis uses alkylation data shown in Figures 2 and 3). The upper panel is DNA alkylation by thiol-activated LM, and the lower panel is DNA alkylation by CEES (5)...

    Hong Zanget al. Sequence Specificity of DNA Alkylation by the Antitumor Natural Produc...

    • ...Using a water molecule probe, steric accessibilities have been calculated by Lavery et al. [17], the order of magnitude being again C8-G > NZ-G...

    J. Senguptaet al. Relative preferences of carcinogenic aromatic nitrenium ions for adduc...

    • ...Simplified 2D representations could next be obtained by projecting these dots onto a plane outside the molecular body [9]...
    • ...A grid method has also been used to determine possible contact nodes for evaluating modified accessibility parameters by Lavery et al. [9], the calculation is then made on the Van der Waals surface itself and takes into account the nature of the intervening atoms)...

    Jacques-emile Duboiset al. Grid stage modelling functions and molecular vector graphics

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