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Keywords
(13)
Dipolar Coupling
Dynamic Properties
Magnetic Resonance
Neutron Scattering
Protein Complex
Sequence Similarity
Structure Analysis
Structure Determination
X Rays
X-ray Scattering
Multi Domain
Rna Recognition Motif
Small Angle Scattering
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NMR and small-angle scattering-based structural analysis of protein complexes in solution
NMR and small-angle scattering-based structural analysis of protein complexes in solution,10.1016/j.jsb.2010.11.004,Journal of Structural Biology,Tobi
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NMR and small-angle scattering-based structural analysis of protein complexes in solution
(
Citations: 2
)
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Tobias Madl
,
Frank Gabel
,
Michael Sattler
Structural analysis of multi-domain protein complexes is a key challenge in current biology and a prerequisite for understanding the molecular basis of essential cellular processes. The use of solution techniques is important for characterizing the quaternary arrangements and dynamics of domains and subunits of these complexes. In this respect solution NMR is the only technique that allows atomic- or residue-resolution
structure determination
and investigation of
dynamic properties
of multi-domain proteins and their complexes. As experimental NMR data for large protein complexes are sparse, it is advantageous to combine these data with additional information from other solution techniques. Here, the utility and computational approaches of combining solution state NMR with small-angle X-ray and
Neutron scattering
(SAXS/SANS) experiments for structural analysis of large protein complexes is reviewed. Recent progress in experimental and computational approaches of combining NMR and SAS are discussed and illustrated with recent examples from the literature. The complementary aspects of combining NMR and SAS data for studying multi-domain proteins, i.e. where weakly interacting domains are connected by flexible linkers, are illustrated with the structural analysis of the tandem
RNA recognition motif
(RRM) domains (RRM1-RRM2) of the human splicing factor U2AF65 bound to a nine-uridine (U9) RNA oligonucleotide.
Journal:
Journal of Structural Biology - J STRUCT BIOL
, vol. 173, no. 3, pp. 472-482, 2011
DOI:
10.1016/j.jsb.2010.11.004
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Citation Context
(1)
...SAXS, SANS) have been successful in providing the structural description of multidomain protein-RNA complexes of 30–40 kDa (
Madl et al. 2010
) (Fig. 4c)...
Cyprian D. Cukier
,
et al.
Modular protein-RNA interactions regulating mRNA metabolism: a role fo...
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(2)
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Citations: 4
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Conference:
Image Processing, IEEE International Conference - ICIP
, 1996
Modular protein-RNA interactions regulating mRNA metabolism: a role for NMR
Cyprian D. Cukier
,
Andres Ramos
Journal:
European Biophysics Journal With Biophysics Letters - EUR BIOPHYS J BIOPHYS LETT
, pp. 1-9